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Gadolinium in PDB, part 2 (files: 41-80), PDB 4n5r-6p4z

Experimental structures of coordination spheres of Gadolinium (Gd) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Gadolinium atoms. PDB files: 41-80 (PDB 4n5r-6p4z).
  1. 4n5r (Gd: 2) - Hen Egg-White Lysozyme Phased Using Free-Electron Laser Data
  2. 4phb (Gd: 12) - Structure of the Polysaccharide Lyase-Like Protein CTHE_2159 From C. Thermocellum, Gadolinium Derivative
  3. 4tws (Gd: 3) - Gadolinium Derivative of Tetragonal Hen Egg-Whote Lysozyme at 1.45 A Resolution
    Other atoms: Cl (13); Na (5);
  4. 4x8i (Gd: 11) - De Novo Crystal Structure of the Pyrococcus Furiosus TET3 Aminopeptidase
    Other atoms: Co (3); Zn (3); Cl (3);
  5. 5c6i (Gd: 2) - Crystal Structure of Gadolinium Derivative of Hewl Solved Using Free- Electron Laser Radiation
    Other atoms: Cl (4);
  6. 5c6j (Gd: 2) - Crystal Structure of Gadolinium Derivative of Hewl Solved Using Free- Electron Laser Radiation
    Other atoms: Cl (4);
  7. 5c6l (Gd: 2) - Crystal Structure of Gadolinium Derivative of Hewl Solved Using Intense Free-Electron Laser Radiation
    Other atoms: Cl (4);
  8. 5f6t (Gd: 1) - Structure of Calexcitin-GD3+ Complex.
    Other atoms: Ca (2);
  9. 5fbh (Gd: 2) - Crystal Structure of the Extracellular Domain of Human Calcium Sensing Receptor with Bound GD3+
    Other atoms: Mg (3); Cl (2);
  10. 5fis (Gd: 3) - Exonuclease Domain-Containing 1 (EXD1) in the Gd Bound Conformation
  11. 5iwt (Gd: 2) - Structure of Transient Receptor Potential (Trp) Channel TRPV6 in the Presence of Gadolinium
  12. 5klf (Gd: 12) - Structure of CBM_E1, A Novel Carbohydrate-Binding Module Found By Sugar Cane Soil Metagenome, Complexed with Cellopentaose and Gadolinium Ion
  13. 5n35 (Gd: 2) - Gadolinium Phased PBP2 (SSO6202) at 2.2 Ang
  14. 5oer (Gd: 2) - Hen Egg-White Lysozyme Refined Against 5000 9 Kev Diffraction Patterns
    Other atoms: Na (1);
  15. 5tc9 (Gd: 1) - Wild Type TRCEL7A Catalytic Domain in A Closed State
  16. 5uo8 (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 3-[(2-Aminoquinolin-7-Yl)Methoxy]-5-((Methylamino) Methyl)Benzonitrile
    Other atoms: Fe (4); Zn (2);
  17. 5uo9 (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 7-[(3-Ethyl-5-((Methylamino)Methyl)Phenoxy) Methyl]Quinolin-2-Amine
    Other atoms: Mg (1); Zn (2); Fe (4); Ca (1); Cl (5);
  18. 5uoa (Gd: 2) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 3-[(2-Amino-4-Methylquinolin-7-Yl)Methoxy]-5- ((Methylamino)Methyl)Benzonitrile
    Other atoms: Zn (3); Fe (2); Cl (2);
  19. 5uob (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with (R)-3-[(2-Amino-4-Methylquinolin-7-Yl)Methoxy]-5-(2- (Methylamino)Propyl)Benzonitrile
    Other atoms: Zn (6); Fe (4); Cl (4);
  20. 5uoc (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with (S)-3-[(2-Amino-4-Methylquinolin-7-Yl)Methoxy]-5-(2- (Methylamino)Propyl)Benzonitrile
    Other atoms: Zn (4); Fe (4); Cl (4);
  21. 5vvb (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 4-(2-(((2-Aminoquinolin-7-Yl)Methyl)Amino)Ethyl)-2- Methylbenzonitrile
    Other atoms: Zn (2); Fe (4); Cl (4);
  22. 5vvc (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 4-(2-(((2-Amino-4-Methylquinolin-7-Yl)Methyl)Amino) Ethyl)-2-Methylbenzonitrile
    Other atoms: Zn (2); Fe (4); Cl (4);
  23. 5vvd (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 4-(2-(((2-Amino-4-Methylquinolin-7-Yl)Methyl)Amino) Ethyl)Benzonitrile
    Other atoms: Zn (2); Fe (4); Cl (4);
  24. 5woa (Gd: 2) - Crystal Structure of Transient Receptor Potential (Trp) Channel TRPV6* in the Presence of Gadolinium
  25. 6av6 (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 6-(3-Fluoro-5-(3-(Methylamino)Propyl)Phenethyl)-4- Methylpyridin-2-Amine
    Other atoms: F (4); Zn (2); Fe (4); Cl (4);
  26. 6av7 (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with HW69
    Other atoms: F (4); Zn (2); Fe (4); Cl (4);
  27. 6c8h (Gd: 1) - Crystal Structure of Transient Receptor Potential (Trp) Channel TRPV4 in the Presence of Gadolinium
  28. 6cie (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with N-(1-(2-(Ethyl(Methyl)Amino)Ethyl)-1,2,3,4- Tetrahydroquino-Lin-6-Yl)Thiophene-2-Carboximidamide
    Other atoms: Zn (2); Fe (4); Cl (4);
  29. 6cif (Gd: 4) - Structure of the Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with N-(1-(Piperidin-4-Yl)Indolin-5-Yl)Thiophene-2- Carboximidamide
    Other atoms: Zn (2); Fe (4); Cl (4);
  30. 6nh1 (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 6-(3-Fluoro-5-(3-(Methylamino)Prop-1-Yn-1-Yl)Phenethyl)- 4-Methylpyridin-2-Amine
    Other atoms: F (4); Zn (4); Fe (4); Cl (4);
  31. 6nh2 (Gd: 2) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with (R)-6-(3-Fluoro-5-(2-(Pyrrolidin-2-Yl)Ethyl)Phenethyl)- 4-Methylpyridin-2-Amine
    Other atoms: F (6); Zn (6); Fe (4); Cl (4);
  32. 6nh3 (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with (S)-6-(3-Fluoro-5-(2-(Pyrrolidin-2-Yl)Ethyl)Phenethyl)- 4-Methylpyridin-2-Amine
    Other atoms: F (8); Zn (6); Fe (4); Cl (4);
  33. 6nh4 (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 6-(3-Fluoro-5-(2-((2R,4S)-4-Fluoropyrrolidin-2-Yl) Ethyl)Phenethyl)-4-Methylpyridin-2-Amine
    Other atoms: F (12); Zn (6); Fe (4); Cl (7);
  34. 6nh5 (Gd: 2) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 6-(3-Fluoro-5-(2-((2R,4S)-4-Fluoro-1-Methylpyrrolidin-2- Yl)Ethyl)Phenethyl)-4-Methylpyridin-2-Amine
    Other atoms: F (8); Zn (4); Fe (4); Cl (4);
  35. 6nh6 (Gd: 4) - Structure of the Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 6-(3-(3-(Dimethylamino)Propyl)-2,6- Difluorophenethyl)-4-Methylpyridin-2-Amine
    Other atoms: F (8); Zn (2); Fe (4); Cl (4);
  36. 6nh7 (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 6-(3-(3-(Dimethylamino)Propyl)-2,5,6- Trifluorophenethyl)-4-Methylpyridin-2-Amine
    Other atoms: F (12); Zn (1); Fe (2);
  37. 6nh8 (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with 6-(5-(3-(Dimethylamino)Propyl)-2,3,4- Trifluorophenethyl)-4-Methylpyridin-2-Amine
    Other atoms: F (12); Zn (2); Fe (4); Cl (4);
  38. 6nhf (Gd: 4) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain in Complex with (S)-6-(2,3-Difluoro-5-(2-(1-Methylazetidin-2-Yl)Ethyl) Phenethyl)-4-Methylpyridin-2-Amine
    Other atoms: F (8); Zn (2); Fe (4); Cl (4);
  39. 6nq7 (Gd: 1) - Crystal Structure of Yetj From Bacillus Subtilis Crystallized in Lipidic Cubic Phase
  40. 6p4z (Gd: 2) - Structure of Gadolinium-Caged Cobalt (III) Insulin Hexamer
    Other atoms: Co (2); Cl (1);
Page generated: Sat May 14 00:42:48 2022

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