Gadolinium in PDB 5tc9: Wild Type TRCEL7A Catalytic Domain in A Closed State

The structure of Wild Type TRCEL7A Catalytic Domain in A Closed State, PDB code: 5tc9 was solved by A.M.Bodenheimer, F.Meilleur, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	74.80 / 1.60
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	152.450, 44.830, 57.520, 90.00, 101.11, 90.00
R / Rfree (%)	16.3 / 19.5

The binding sites of Gadolinium atom in the Wild Type TRCEL7A Catalytic Domain in A Closed State (pdb code 5tc9). This binding sites where shown within 5.0 Angstroms radius around Gadolinium atom.
In total only one binding site of Gadolinium was determined in the Wild Type TRCEL7A Catalytic Domain in A Closed State, PDB code: 5tc9:

Gadolinium binding site 1 out of 1 in the Wild Type TRCEL7A Catalytic Domain in A Closed State


Mono view


Stereo pair view

A full contact list of Gadolinium with other atoms in the Gd binding site number 1 of Wild Type TRCEL7A Catalytic Domain in A Closed State within 5.0Å range: probe atom residue distance (Å) B Occ A:Gd504 b:6.5 occ:0.50 O A:HOH605 1.9 14.2 0.8 OE2 A:GLU325 2.5 12.2 1.0 OE1 A:GLU295 2.6 9.7 1.0 OE2 A:GLU295 2.6 9.3 1.0 O A:HOH615 2.7 8.0 1.0 CD A:GLU295 3.0 8.9 1.0 CD A:GLU325 3.7 12.0 1.0 OE1 A:GLU325 4.3 12.7 1.0 CG A:GLU295 4.5 8.7 1.0 O A:HOH631 4.5 11.5 1.0 O A:HOH989 4.6 9.7 1.0 O A:HOH813 4.7 13.4 1.0 CG A:GLU325 4.8 11.4 1.0

A.M.Bodenheimer, F.Meilleur. Crystal Structures of Wild-Type Trichoderma Reesei CEL7A Catalytic Domain in Open and Closed States. Febs Lett. V. 590 4429 2016.
ISSN: ISSN 1873-3468
PubMed: 27943301
DOI: 10.1002/1873-3468.12464