Gadolinium in PDB 6nq7: Crystal Structure of Yetj From Bacillus Subtilis Crystallized in Lipidic Cubic Phase

The structure of Crystal Structure of Yetj From Bacillus Subtilis Crystallized in Lipidic Cubic Phase, PDB code: 6nq7 was solved by G.Guo, Y.Chang, Q.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.22 / 2.50
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	33.864, 63.037, 47.336, 90.00, 93.95, 90.00
R / Rfree (%)	24.3 / 26

The binding sites of Gadolinium atom in the Crystal Structure of Yetj From Bacillus Subtilis Crystallized in Lipidic Cubic Phase (pdb code 6nq7). This binding sites where shown within 5.0 Angstroms radius around Gadolinium atom.
In total only one binding site of Gadolinium was determined in the Crystal Structure of Yetj From Bacillus Subtilis Crystallized in Lipidic Cubic Phase, PDB code: 6nq7:

Gadolinium binding site 1 out of 1 in the Crystal Structure of Yetj From Bacillus Subtilis Crystallized in Lipidic Cubic Phase


Mono view


Stereo pair view

A full contact list of Gadolinium with other atoms in the Gd binding site number 1 of Crystal Structure of Yetj From Bacillus Subtilis Crystallized in Lipidic Cubic Phase within 5.0Å range: probe atom residue distance (Å) B Occ A:Gd301 b:37.5 occ:0.52 O A:HOH429 2.3 36.1 1.0 O A:HOH425 2.3 37.2 1.0 ND1 A:HIS87 2.4 32.7 1.0 CG A:HIS87 3.3 31.8 1.0 CE1 A:HIS87 3.4 31.6 1.0 CB A:HIS87 3.5 31.4 1.0 CA A:HIS87 4.1 30.9 1.0 CD2 A:HIS87 4.4 31.4 1.0 NE2 A:HIS87 4.4 31.6 1.0 O A:PRO83 4.9 38.0 1.0 N A:HIS87 5.0 31.0 1.0

G.Guo, M.Xu, Y.Chang, T.Luyten, B.Seitaj, W.Liu, P.Zhu, G.Bultynck, L.Shi, M.Quick, Q.Liu. Ion and pH Sensitivity of A Tmbim CA2+Channel. Structure V. 27 1013 2019.
ISSN: ISSN 0969-2126
PubMed: 30930064
DOI: 10.1016/J.STR.2019.03.003