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Gadolinium in PDB 6yxf: Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect
Protein crystallography data
The structure of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect, PDB code: 6yxf
was solved by
R.D.Healey,
S.Basu,
A.S.Humm,
C.Leyrat,
F.Dupeux,
A.Pica,
S.Granier,
J.A.Marquez,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 48.67 / 3.03 |
| Space group | P 21 2 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 74.64, 100.65, 111.2, 90, 90, 90 |
| R / Rfree (%) | 21.4 / 25.9 |
Other elements in 6yxf:
The structure of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect also contains other interesting chemical elements:
| Zinc | (Zn) | 1 atom |
Gadolinium Binding Sites:
The binding sites of Gadolinium atom in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect
(pdb code 6yxf). This binding sites where shown within
5.0 Angstroms radius around Gadolinium atom.
In total 3 binding sites of Gadolinium where determined in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect, PDB code: 6yxf:
Jump to Gadolinium binding site number: 1; 2; 3;
In total 3 binding sites of Gadolinium where determined in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect, PDB code: 6yxf:
Jump to Gadolinium binding site number: 1; 2; 3;
Gadolinium binding site 1 out of 3 in 6yxf
Go back to
Gadolinium Binding Sites List in 6yxf
Gadolinium binding site 1 out
of 3 in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Gadolinium with other atoms in the Gd binding
site number 1 of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect within 5.0Å range:
|
Gadolinium binding site 2 out of 3 in 6yxf
Go back to
Gadolinium Binding Sites List in 6yxf
Gadolinium binding site 2 out
of 3 in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Gadolinium with other atoms in the Gd binding
site number 2 of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect within 5.0Å range:
|
Gadolinium binding site 3 out of 3 in 6yxf
Go back to
Gadolinium Binding Sites List in 6yxf
Gadolinium binding site 3 out
of 3 in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Gadolinium with other atoms in the Gd binding
site number 3 of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect within 5.0Å range:
|
Reference:
R.D.Healey,
S.Basu,
A.S.Humm,
C.Leyrat,
F.Dupeux,
A.Pica,
S.Granier,
J.A.Marquez.
Rapid, Automated Serial Crystallography Analysis of Membrane Proteins Through Crystaldirect To Be Published.
Page generated: Sat Jul 10 15:57:42 2021
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