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Gadolinium in PDB 6yuo: Capsule O-Acetyltransferase of Neisseria Meningitidis Serogroup A in Complex with Caged Gadolinium

Protein crystallography data

The structure of Capsule O-Acetyltransferase of Neisseria Meningitidis Serogroup A in Complex with Caged Gadolinium, PDB code: 6yuo was solved by J.T.Cramer, T.Fiebig, R.Fedorov, M.Muehlenhoff, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.87 / 2.20
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 132.930, 132.930, 69.270, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 21.9

Other elements in 6yuo:

The structure of Capsule O-Acetyltransferase of Neisseria Meningitidis Serogroup A in Complex with Caged Gadolinium also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Gadolinium Binding Sites:

The binding sites of Gadolinium atom in the Capsule O-Acetyltransferase of Neisseria Meningitidis Serogroup A in Complex with Caged Gadolinium (pdb code 6yuo). This binding sites where shown within 5.0 Angstroms radius around Gadolinium atom.
In total 2 binding sites of Gadolinium where determined in the Capsule O-Acetyltransferase of Neisseria Meningitidis Serogroup A in Complex with Caged Gadolinium, PDB code: 6yuo:
Jump to Gadolinium binding site number: 1; 2;

Gadolinium binding site 1 out of 2 in 6yuo

Go back to Gadolinium Binding Sites List in 6yuo
Gadolinium binding site 1 out of 2 in the Capsule O-Acetyltransferase of Neisseria Meningitidis Serogroup A in Complex with Caged Gadolinium


Mono view


Stereo pair view

A full contact list of Gadolinium with other atoms in the Gd binding site number 1 of Capsule O-Acetyltransferase of Neisseria Meningitidis Serogroup A in Complex with Caged Gadolinium within 5.0Å range:

Gadolinium binding site 2 out of 2 in 6yuo

Go back to Gadolinium Binding Sites List in 6yuo
Gadolinium binding site 2 out of 2 in the Capsule O-Acetyltransferase of Neisseria Meningitidis Serogroup A in Complex with Caged Gadolinium


Mono view


Stereo pair view

A full contact list of Gadolinium with other atoms in the Gd binding site number 2 of Capsule O-Acetyltransferase of Neisseria Meningitidis Serogroup A in Complex with Caged Gadolinium within 5.0Å range:

Reference:

T.Fiebig, J.T.Cramer, A.Bethe, P.Baruch, U.Curth, J.I.Fuhring, F.F.R.Buettner, U.Vogel, M.Schubert, R.Fedorov, M.Muhlenhoff. Structural and Mechanistic Basis of Capsule O-Acetylation in Neisseria Meningitidis Serogroup A. Nat Commun V. 11 4723 2020.
ISSN: ESSN 2041-1723
PubMed: 32948778
DOI: 10.1038/S41467-020-18464-Y
Page generated: Sun Dec 13 19:01:23 2020

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